HL_8E45_030

3D structure

PDB id

8E45 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to antibiotic analog SLC17

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

GACGCUUAUGCGUU

Length

14 nucleotides

Bulged bases

8E45|1|I|C|1172, 8E45|1|I|U|1174, 8E45|1|I|A|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E45|1|I|G|1168
8E45|1|I|A|1169
8E45|1|I|C|1170
8E45|1|I|G|1171
8E45|1|I|C|1172
8E45|1|I|U|1173
8E45|1|I|U|1174
8E45|1|I|A|1175
8E45|1|I|U|1176
8E45|1|I|G|1177
8E45|1|I|C|1178
8E45|1|I|G|1179
8E45|1|I|U|1180
8E45|1|I|U|1181

Current chains

Chain I

23S ribosomal RNA

Nearby chains