HL_8E45_051

3D structure

PDB id

8E45 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to antibiotic analog SLC17

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

GUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAAAUACCAC

Length

57 nucleotides

Bulged bases

8E45|1|I|G|2128, 8E45|1|I|U|2132, 8E45|1|I|A|2135, 8E45|1|I|C|2145, 8E45|1|I|C|2146, 8E45|1|I|A|2154, 8E45|1|I|U|2155, 8E45|1|I|G|2157, 8E45|1|I|G|2159, 8E45|1|I|C|2174

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E45|1|I|G|2121
8E45|1|I|U|2122
8E45|1|I|G|2123
8E45|1|I|G|2124
8E45|1|I|G|2125
8E45|1|I|A|2126
8E45|1|I|G|2127
8E45|1|I|G|2128
8E45|1|I|C|2129
8E45|1|I|U|2130
8E45|1|I|U|2131
8E45|1|I|U|2132
8E45|1|I|G|2133
8E45|1|I|A|2134
8E45|1|I|A|2135
8E45|1|I|G|2136
8E45|1|I|U|2137
8E45|1|I|G|2138
8E45|1|I|U|2139
8E45|1|I|G|2140
8E45|1|I|G|2141
8E45|1|I|A|2142
8E45|1|I|C|2143
8E45|1|I|G|2144
8E45|1|I|C|2145
8E45|1|I|C|2146
8E45|1|I|A|2147
8E45|1|I|G|2148
8E45|1|I|U|2149
8E45|1|I|C|2150
8E45|1|I|U|2151
8E45|1|I|G|2152
8E45|1|I|C|2153
8E45|1|I|A|2154
8E45|1|I|U|2155
8E45|1|I|G|2156
8E45|1|I|G|2157
8E45|1|I|A|2158
8E45|1|I|G|2159
8E45|1|I|C|2160
8E45|1|I|C|2161
8E45|1|I|G|2162
8E45|1|I|A|2163
8E45|1|I|C|2164
8E45|1|I|C|2165
8E45|1|I|U|2166
8E45|1|I|U|2167
8E45|1|I|G|2168
8E45|1|I|A|2169
8E45|1|I|A|2170
8E45|1|I|A|2171
8E45|1|I|U|2172
8E45|1|I|A|2173
8E45|1|I|C|2174
8E45|1|I|C|2175
8E45|1|I|A|2176
8E45|1|I|C|2177

Current chains

Chain I

23S ribosomal RNA

Nearby chains