HL_8E45_074

3D structure

PDB id

8E45 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to antibiotic analog SLC17

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

AGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACU

Length

52 nucleotides

Bulged bases

8E45|1|I|U|1061, 8E45|1|I|U|1078, 8E45|1|I|A|1095, 8E45|1|I|A|1096

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E45|1|I|A|1054
8E45|1|I|G|1055
8E45|1|I|G|1056
8E45|1|I|A|1057
8E45|1|I|U|1058
8E45|1|I|G|1059
8E45|1|I|U|1060
8E45|1|I|U|1061
8E45|1|I|G|1062
8E45|1|I|G|1063
8E45|1|I|C|1064
8E45|1|I|U|1065
8E45|1|I|U|1066
8E45|1|I|A|1067
8E45|1|I|G|1068
8E45|1|I|A|1069
8E45|1|I|A|1070
8E45|1|I|G|1071
8E45|1|I|C|1072
8E45|1|I|A|1073
8E45|1|I|G|1074
8E45|1|I|C|1075
8E45|1|I|C|1076
8E45|1|I|A|1077
8E45|1|I|U|1078
8E45|1|I|C|1079
8E45|1|I|A|1080
8E45|1|I|U|1081
8E45|1|I|U|1082
8E45|1|I|U|1083
8E45|1|I|A|1084
8E45|1|I|A|1085
8E45|1|I|A|1086
8E45|1|I|G|1087
8E45|1|I|A|1088
8E45|1|I|A|1089
8E45|1|I|A|1090
8E45|1|I|G|1091
8E45|1|I|C|1092
8E45|1|I|G|1093
8E45|1|I|U|1094
8E45|1|I|A|1095
8E45|1|I|A|1096
8E45|1|I|U|1097
8E45|1|I|A|1098
8E45|1|I|G|1099
8E45|1|I|C|1100
8E45|1|I|U|1101
8E45|1|I|C|1102
8E45|1|I|A|1103
8E45|1|I|C|1104
8E45|1|I|U|1105

Current chains

Chain I

23S ribosomal RNA

Nearby chains