HL_8E46_038

3D structure

PDB id

8E46 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to antibiotic analog SLC21

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

GCACUACGGUGC

Length

12 nucleotides

Bulged bases

8E46|1|I|A|1535, 8E46|1|I|G|1537

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E46|1|I|G|1530
8E46|1|I|C|1531
8E46|1|I|A|1532
8E46|1|I|C|1533
8E46|1|I|U|1534
8E46|1|I|A|1535
8E46|1|I|C|1536
8E46|1|I|G|1537
8E46|1|I|G|1538
8E46|1|I|U|1539
8E46|1|I|G|1540
8E46|1|I|C|1541

Current chains

Chain I

23S ribosomal RNA

Nearby chains