Loop HL_8E46

3D structure

PDB id: 8E46 (explore in PDB, NAKB, or RNA 3D Hub)
Description: E. coli 50S ribosome bound to antibiotic analog SLC21
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.32 Å

Loop

Sequence: GUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAAAUACCAC
Length: 57 nucleotides
Bulged bases: 8E46|1|I|U|2131, 8E46|1|I|U|2132, 8E46|1|I|G|2133, 8E46|1|I|C|2145, 8E46|1|I|A|2154, 8E46|1|I|U|2155, 8E46|1|I|U|2172
QA status: Unknown status

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

8E46|1|I|G|2121
8E46|1|I|U|2122
8E46|1|I|G|2123
8E46|1|I|G|2124
8E46|1|I|G|2125
8E46|1|I|A|2126
8E46|1|I|G|2127
8E46|1|I|G|2128
8E46|1|I|C|2129
8E46|1|I|U|2130
8E46|1|I|U|2131
8E46|1|I|U|2132
8E46|1|I|G|2133
8E46|1|I|A|2134
8E46|1|I|A|2135
8E46|1|I|G|2136
8E46|1|I|U|2137
8E46|1|I|G|2138
8E46|1|I|U|2139
8E46|1|I|G|2140
8E46|1|I|G|2141
8E46|1|I|A|2142
8E46|1|I|C|2143
8E46|1|I|G|2144
8E46|1|I|C|2145
8E46|1|I|C|2146
8E46|1|I|A|2147
8E46|1|I|G|2148
8E46|1|I|U|2149
8E46|1|I|C|2150
8E46|1|I|U|2151
8E46|1|I|G|2152
8E46|1|I|C|2153
8E46|1|I|A|2154
8E46|1|I|U|2155
8E46|1|I|G|2156
8E46|1|I|G|2157
8E46|1|I|A|2158
8E46|1|I|G|2159
8E46|1|I|C|2160
8E46|1|I|C|2161
8E46|1|I|G|2162
8E46|1|I|A|2163
8E46|1|I|C|2164
8E46|1|I|C|2165
8E46|1|I|U|2166
8E46|1|I|U|2167
8E46|1|I|G|2168
8E46|1|I|A|2169
8E46|1|I|A|2170
8E46|1|I|A|2171
8E46|1|I|U|2172
8E46|1|I|A|2173
8E46|1|I|C|2174
8E46|1|I|C|2175
8E46|1|I|A|2176
8E46|1|I|C|2177

Current chains

Chain I: 23S ribosomal RNA

Nearby chains

No other chains within 10Å

HL_8E46_051