HL_8E46_076

3D structure

PDB id

8E46 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to antibiotic analog SLC21

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

AUGUUGGCUUAGAAGCAGCCAUCAUU

Length

26 nucleotides

Bulged bases

8E46|1|I|U|1078

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E46|1|I|A|1057
8E46|1|I|U|1058
8E46|1|I|G|1059
8E46|1|I|U|1060
8E46|1|I|U|1061
8E46|1|I|G|1062
8E46|1|I|G|1063
8E46|1|I|C|1064
8E46|1|I|U|1065
8E46|1|I|U|1066
8E46|1|I|A|1067
8E46|1|I|G|1068
8E46|1|I|A|1069
8E46|1|I|A|1070
8E46|1|I|G|1071
8E46|1|I|C|1072
8E46|1|I|A|1073
8E46|1|I|G|1074
8E46|1|I|C|1075
8E46|1|I|C|1076
8E46|1|I|A|1077
8E46|1|I|U|1078
8E46|1|I|C|1079
8E46|1|I|A|1080
8E46|1|I|U|1081
8E46|1|I|U|1082

Current chains

Chain I

23S ribosomal RNA

Nearby chains