HL_8E48_076

3D structure

PDB id

8E48 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to antibiotic analog SLC30

Experimental method

ELECTRON MICROSCOPY

Resolution

2.27 Å

Loop

Sequence

GGCGACGGUUGUCC

Length

14 nucleotides

Bulged bases

8E48|1|I|G|1452, 8E48|1|I|A|1453, 8E48|1|I|C|1454, 8E48|1|I|U|1460

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E48|1|I|G|1449
8E48|1|I|G|1450
8E48|1|I|C|1451
8E48|1|I|G|1452
8E48|1|I|A|1453
8E48|1|I|C|1454
8E48|1|I|G|1455
8E48|1|I|G|1456
8E48|1|I|U|1457
8E48|1|I|U|1458
8E48|1|I|G|1459
8E48|1|I|U|1460
8E48|1|I|C|1461
8E48|1|I|C|1462

Current chains

Chain I

23S ribosomal RNA

Nearby chains