HL_8E49_025

3D structure

PDB id

8E49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to antibiotic analog SLC31

Experimental method

ELECTRON MICROSCOPY

Resolution

2.05 Å

Loop

Sequence

GGGGGUCACUUACC

Length

14 nucleotides

Bulged bases

8E49|1|I|C|885

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E49|1|I|G|879
8E49|1|I|G|880
8E49|1|I|G|881
8E49|1|I|G|882
8E49|1|I|G|883
8E49|1|I|U|884
8E49|1|I|C|885
8E49|1|I|A|892
8E49|1|I|C|893
8E49|1|I|U|894
8E49|1|I|U|895
8E49|1|I|A|896
8E49|1|I|C|897
8E49|1|I|C|898

Current chains

Chain I

23S ribosomal RNA

Nearby chains