HL_8E49_075

3D structure

PDB id

8E49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to antibiotic analog SLC31

Experimental method

ELECTRON MICROSCOPY

Resolution

2.05 Å

Loop

Sequence

GGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCAC

Length

50 nucleotides

Bulged bases

8E49|1|I|U|1061, 8E49|1|I|A|1069, 8E49|1|I|U|1078

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E49|1|I|G|1055
8E49|1|I|G|1056
8E49|1|I|A|1057
8E49|1|I|U|1058
8E49|1|I|G|1059
8E49|1|I|U|1060
8E49|1|I|U|1061
8E49|1|I|G|1062
8E49|1|I|G|1063
8E49|1|I|C|1064
8E49|1|I|U|1065
8E49|1|I|U|1066
8E49|1|I|A|1067
8E49|1|I|G|1068
8E49|1|I|A|1069
8E49|1|I|A|1070
8E49|1|I|G|1071
8E49|1|I|C|1072
8E49|1|I|A|1073
8E49|1|I|G|1074
8E49|1|I|C|1075
8E49|1|I|C|1076
8E49|1|I|A|1077
8E49|1|I|U|1078
8E49|1|I|C|1079
8E49|1|I|A|1080
8E49|1|I|U|1081
8E49|1|I|U|1082
8E49|1|I|U|1083
8E49|1|I|A|1084
8E49|1|I|A|1085
8E49|1|I|A|1086
8E49|1|I|G|1087
8E49|1|I|A|1088
8E49|1|I|A|1089
8E49|1|I|A|1090
8E49|1|I|G|1091
8E49|1|I|C|1092
8E49|1|I|G|1093
8E49|1|I|U|1094
8E49|1|I|A|1095
8E49|1|I|A|1096
8E49|1|I|U|1097
8E49|1|I|A|1098
8E49|1|I|G|1099
8E49|1|I|C|1100
8E49|1|I|U|1101
8E49|1|I|C|1102
8E49|1|I|A|1103
8E49|1|I|C|1104

Current chains

Chain I

23S ribosomal RNA

Nearby chains