HL_8EMM_014
3D structure
- PDB id
- 8EMM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substrates
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- GCUCAAC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8EMM_014 not in the Motif Atlas
- Homologous match to HL_4LFB_014
- Geometric discrepancy: 0.0777
- The information below is about HL_4LFB_014
- Detailed Annotation
- GNRA-like with tWH
- Broad Annotation
- GNRA
- Motif group
- HL_92337.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
8EMM|1|A|G|617
8EMM|1|A|C|618
8EMM|1|A|U|619
8EMM|1|A|C|620
8EMM|1|A|A|621
8EMM|1|A|A|622
8EMM|1|A|C|623
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain D
- 30S ribosomal protein S4
- Chain P
- 30S ribosomal protein S16
Coloring options: