HL_8EV6_137

3D structure

PDB id

8EV6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

2.946 Å

Loop

Sequence

GGCCCACCAGCC

Length

12 nucleotides

Bulged bases

8EV6|1|2A|C|888

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8EV6|1|2A|G|882
8EV6|1|2A|G|883
8EV6|1|2A|C|884
8EV6|1|2A|C|885
8EV6|1|2A|C|886
8EV6|1|2A|A|887
8EV6|1|2A|C|888
8EV6|1|2A|C|889
8EV6|1|2A|A|890
8EV6|1|2A|G|892
8EV6|1|2A|C|893
8EV6|1|2A|C|894

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2m

30S ribosomal protein S13

Chain 2w

Transfer RNA; tRNA