HL_8EV7_025

3D structure

PDB id

8EV7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

2.89 Å

Loop

Sequence

GGCCCACCAGCC

Length

12 nucleotides

Bulged bases

8EV7|1|1A|C|935, 8EV7|1|1A|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8EV7|1|1A|G|929
8EV7|1|1A|G|930
8EV7|1|1A|C|931
8EV7|1|1A|C|932
8EV7|1|1A|C|933
8EV7|1|1A|A|934
8EV7|1|1A|C|935
8EV7|1|1A|C|936
8EV7|1|1A|A|937
8EV7|1|1A|G|938
8EV7|1|1A|C|939
8EV7|1|1A|C|940

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1m

30S ribosomal protein S13

Chain 1w

Transfer RNA; tRNA