HL_8EV7_039
3D structure
- PDB id
- 8EV7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAs
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.89 Å
Loop
- Sequence
- CGACACAG
- Length
- 8 nucleotides
- Bulged bases
- 8EV7|1|1A|A|1660, 8EV7|1|1A|A|1662, 8EV7|1|1A|A|1664
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8EV7_039 not in the Motif Atlas
- Homologous match to HL_7RQB_040
- Geometric discrepancy: 0.0515
- The information below is about HL_7RQB_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_64430.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
8EV7|1|1A|C|1658
8EV7|1|1A|G|1659
8EV7|1|1A|A|1660
8EV7|1|1A|C|1661
8EV7|1|1A|A|1662
8EV7|1|1A|C|1663
8EV7|1|1A|A|1664
8EV7|1|1A|G|1665
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 17
- 50S ribosomal protein L34
- Chain 1W
- 50S ribosomal protein L22
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