HL_8EV7_190

3D structure

PDB id

8EV7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

2.89 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

8EV7|1|2a|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8EV7_190 not in the Motif Atlas

Homologous match to HL_4LFB_009

Geometric discrepancy: 0.1137

The information below is about HL_4LFB_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

49

Unit IDs

8EV7|1|2a|C|342
8EV7|1|2a|U|343
8EV7|1|2a|A|344
8EV7|1|2a|C|345
8EV7|1|2a|G|346
8EV7|1|2a|G|347

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2O

50S ribosomal protein L14

Chain 2T

50S ribosomal protein L19