HL_8EVQ_023
3D structure
- PDB id
- 8EVQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypopseudouridylated Ribosome bound with TSV IRES, eEF2, GDP, and sordarin, Structure I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.72 Å
Loop
- Sequence
- UUCCGGGGUCACCUUGA
- Length
- 17 nucleotides
- Bulged bases
- 8EVQ|1|A1|C|1016, 8EVQ|1|A1|G|1018, 8EVQ|1|A1|A|1030
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8EVQ|1|A1|U|1014
8EVQ|1|A1|U|1015
8EVQ|1|A1|C|1016
8EVQ|1|A1|C|1017
8EVQ|1|A1|G|1018
8EVQ|1|A1|G|1019
8EVQ|1|A1|G|1020
8EVQ|1|A1|G|1021
8EVQ|1|A1|U|1022
8EVQ|1|A1|C|1023
8EVQ|1|A1|A|1030
8EVQ|1|A1|C|1031
8EVQ|1|A1|C|1032
8EVQ|1|A1|U|1033
8EVQ|1|A1|U|1034
8EVQ|1|A1|G|1035
8EVQ|1|A1|A|1036
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain EC
- Taura syndrome virus (TSV) internal ribosome entry site (IRES) RNA
Coloring options: