HL_8EVQ_081
3D structure
- PDB id
- 8EVQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypopseudouridylated Ribosome bound with TSV IRES, eEF2, GDP, and sordarin, Structure I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.72 Å
Loop
- Sequence
- CGACCCUUUGGAAG
- Length
- 14 nucleotides
- Bulged bases
- 8EVQ|1|B5|C|191, 8EVQ|1|B5|U|192, 8EVQ|1|B5|U|194
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8EVQ_081 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.2893
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
8EVQ|1|B5|C|186
8EVQ|1|B5|G|187
8EVQ|1|B5|A|188
8EVQ|1|B5|C|189
8EVQ|1|B5|C|190
8EVQ|1|B5|C|191
8EVQ|1|B5|U|192
8EVQ|1|B5|U|193
8EVQ|1|B5|U|194
8EVQ|1|B5|G|195
8EVQ|1|B5|G|196
8EVQ|1|B5|A|197
8EVQ|1|B5|A|198
8EVQ|1|B5|G|199
Current chains
- Chain B5
- 18S rRNA
Nearby chains
- Chain BI
- 40S ribosomal protein S8-A
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