HL_8EVQ_115

3D structure

PDB id

8EVQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Hypopseudouridylated Ribosome bound with TSV IRES, eEF2, GDP, and sordarin, Structure I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CAUCGAAAACUCUCCGAACACGGUGU*G

Length

27 nucleotides

Bulged bases

8EVQ|1|EC|A|6792, 8EVQ|1|EC|C|6794

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8EVQ|1|EC|C|6785
8EVQ|1|EC|A|6786
8EVQ|1|EC|U|6787
8EVQ|1|EC|C|6788
8EVQ|1|EC|G|6789
8EVQ|1|EC|A|6790
8EVQ|1|EC|A|6791
8EVQ|1|EC|A|6792
8EVQ|1|EC|A|6793
8EVQ|1|EC|C|6794
8EVQ|1|EC|U|6795
8EVQ|1|EC|C|6796
8EVQ|1|EC|U|6797
8EVQ|1|EC|C|6798
8EVQ|1|EC|C|6799
8EVQ|1|EC|G|6800
8EVQ|1|EC|A|6801
8EVQ|1|EC|A|6802
8EVQ|1|EC|C|6803
8EVQ|1|EC|A|6804
8EVQ|1|EC|C|6805
8EVQ|1|EC|G|6808
8EVQ|1|EC|G|6809
8EVQ|1|EC|U|6810
8EVQ|1|EC|G|6811
8EVQ|1|EC|U|6810
*
8EVQ|1|EC|G|6811

Current chains

Chain EC

Taura syndrome virus (TSV) internal ribosome entry site (IRES) RNA

Nearby chains