HL_8EVR_105

3D structure

PDB id

8EVR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II

Experimental method

ELECTRON MICROSCOPY

Resolution

2.87 Å

Loop

Sequence

CUAUUUAG

Length

8 nucleotides

Bulged bases

8EVR|1|EC|A|6840, 8EVR|1|EC|U|6843

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8EVR|1|EC|C|6838
8EVR|1|EC|U|6839
8EVR|1|EC|A|6840
8EVR|1|EC|U|6841
8EVR|1|EC|U|6842
8EVR|1|EC|U|6843
8EVR|1|EC|A|6844
8EVR|1|EC|G|6845

Current chains

Chain EC

TSV IRES

Nearby chains

Chain BF

Rps5p

Chain BO

40S ribosomal protein S14-A