HL_8EVT_023
3D structure
- PDB id
- 8EVT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) refined against a composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GUUCCGGGGUCACCUUGAC
- Length
- 19 nucleotides
- Bulged bases
- 8EVT|1|A1|U|1014, 8EVT|1|A1|C|1016, 8EVT|1|A1|G|1018
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8EVT|1|A1|G|1013
8EVT|1|A1|U|1014
8EVT|1|A1|U|1015
8EVT|1|A1|C|1016
8EVT|1|A1|C|1017
8EVT|1|A1|G|1018
8EVT|1|A1|G|1019
8EVT|1|A1|G|1020
8EVT|1|A1|G|1021
8EVT|1|A1|U|1022
8EVT|1|A1|C|1023
8EVT|1|A1|A|1030
8EVT|1|A1|C|1031
8EVT|1|A1|C|1032
8EVT|1|A1|U|1033
8EVT|1|A1|U|1034
8EVT|1|A1|G|1035
8EVT|1|A1|A|1036
8EVT|1|A1|C|1037
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AJ
- RPL11A isoform 1
- Chain BP
- RPS15 isoform 1
Coloring options: