HL_8EWB_059
3D structure
- PDB id
- 8EWB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure III
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.87 Å
Loop
- Sequence
- U(OMU)UCAG(OMU)GUGA
- Length
- 11 nucleotides
- Bulged bases
- 8EWB|1|A1|A|2727
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8EWB|1|A1|U|2723
8EWB|1|A1|OMU|2724
8EWB|1|A1|U|2725
8EWB|1|A1|C|2726
8EWB|1|A1|A|2727
8EWB|1|A1|G|2728
8EWB|1|A1|OMU|2729
8EWB|1|A1|G|2730
8EWB|1|A1|U|2731
8EWB|1|A1|G|2732
8EWB|1|A1|A|2733
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AQ
- 60S ribosomal protein L18-A
- Chain AT
- 60S ribosomal protein L21-A
- Chain Aa
- 60S ribosomal protein L28
- Chain Ab
- RPL29 isoform 1
- Chain Ao
- 60S ribosomal protein L42-A
Coloring options: