3D structure

PDB id
8EYQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
30S_delta_ksgA_h44_inactive_conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
CUUCGG
Length
6 nucleotides
Bulged bases
8EYQ|1|A|U|209
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_8EYQ_005 not in the Motif Atlas
Homologous match to HL_5J7L_005
Geometric discrepancy: 0.4637
The information below is about HL_5J7L_005
Detailed Annotation
UNCG
Broad Annotation
No text annotation
Motif group
HL_34617.5
Basepair signature
cWW-tSW-F
Number of instances in this motif group
57

Unit IDs

8EYQ|1|A|C|207
8EYQ|1|A|U|208
8EYQ|1|A|U|209
8EYQ|1|A|C|210
8EYQ|1|A|G|211
8EYQ|1|A|G|212

Current chains

Chain A
16S_rRNA

Nearby chains

No other chains within 10Å

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.0909 s