HL_8EYQ_012

3D structure

PDB id

8EYQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S_delta_ksgA_h44_inactive_conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

8EYQ|1|A|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8EYQ_012 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.1489

The information below is about HL_5J7L_012

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8EYQ|1|A|G|462
8EYQ|1|A|U|463
8EYQ|1|A|U|464
8EYQ|1|A|A|465
8EYQ|1|A|A|466
8EYQ|1|A|U|467
8EYQ|1|A|A|468
8EYQ|1|A|C|469
8EYQ|1|A|C|470

Current chains

Chain A

16S_rRNA

Nearby chains