3D structure

PDB id
8EYQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
30S_delta_ksgA_h44_inactive_conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
CGCAAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_8EYQ_020 not in the Motif Atlas
Homologous match to HL_4LFB_020
Geometric discrepancy: 0.139
The information below is about HL_4LFB_020
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.8
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
352

Unit IDs

8EYQ|1|A|C|897
8EYQ|1|A|G|898
8EYQ|1|A|C|899
8EYQ|1|A|A|900
8EYQ|1|A|A|901
8EYQ|1|A|G|902

Current chains

Chain A
16S_rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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