HL_8EYT_012

3D structure

PDB id

8EYT (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S_delta_ksgA+KsgA complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

8EYT|1|A|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8EYT_012 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.1361

The information below is about HL_5J7L_012

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8EYT|1|A|G|462
8EYT|1|A|U|463
8EYT|1|A|U|464
8EYT|1|A|A|465
8EYT|1|A|A|466
8EYT|1|A|U|467
8EYT|1|A|A|468
8EYT|1|A|C|469
8EYT|1|A|C|470

Current chains

Chain A

16S rRNA

Nearby chains