HL_8FC1_213

3D structure

PDB id

8FC1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.50A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

8FC1|1|2A|A|1067, 8FC1|1|2A|G|1068, 8FC1|1|2A|A|1070, 8FC1|1|2A|G|1071, 8FC1|1|2A|C|1072

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FC1|1|2A|C|1064
8FC1|1|2A|U|1065
8FC1|1|2A|U|1066
8FC1|1|2A|A|1067
8FC1|1|2A|G|1068
8FC1|1|2A|A|1069
8FC1|1|2A|A|1070
8FC1|1|2A|G|1071
8FC1|1|2A|C|1072
8FC1|1|2A|A|1073
8FC1|1|2A|G|1074

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2Q

50S ribosomal protein L16