HL_8FC4_132

3D structure

PDB id

8FC4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.45A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.45 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

8FC4|1|2A|G|1068, 8FC4|1|2A|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FC4|1|2A|C|1064
8FC4|1|2A|U|1065
8FC4|1|2A|U|1066
8FC4|1|2A|A|1067
8FC4|1|2A|G|1068
8FC4|1|2A|A|1069
8FC4|1|2A|A|1070
8FC4|1|2A|G|1071
8FC4|1|2A|C|1072
8FC4|1|2A|A|1073
8FC4|1|2A|G|1074

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2Q

50S ribosomal protein L16