HL_8FIZ_009

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

8FIZ|1|AA|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FIZ_009 not in the Motif Atlas

Homologous match to HL_5J7L_009

Geometric discrepancy: 0.1451

The information below is about HL_5J7L_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

8FIZ|1|AA|C|342
8FIZ|1|AA|U|343
8FIZ|1|AA|A|344
8FIZ|1|AA|C|345
8FIZ|1|AA|G|346
8FIZ|1|AA|G|347

Current chains

Chain AA

16S rRNA

Nearby chains

Chain BS

50S ribosomal protein L14

Chain BW

50S ribosomal protein L19