HL_8FIZ_011

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

8FIZ|1|AA|U|421

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FIZ_011 not in the Motif Atlas

Homologous match to HL_4LFB_011

Geometric discrepancy: 0.1494

The information below is about HL_4LFB_011

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

8FIZ|1|AA|C|419
8FIZ|1|AA|U|420
8FIZ|1|AA|U|421
8FIZ|1|AA|C|422
8FIZ|1|AA|G|423
8FIZ|1|AA|G|424

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AG

30S ribosomal protein S3

Chain AI

30S ribosomal protein S4