HL_8FIZ_028

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GAGUCUGCAACUCGACUC

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FIZ|1|AA|G|1310
8FIZ|1|AA|A|1311
8FIZ|1|AA|G|1312
8FIZ|1|AA|U|1313
8FIZ|1|AA|C|1314
8FIZ|1|AA|U|1315
8FIZ|1|AA|G|1316
8FIZ|1|AA|C|1317
8FIZ|1|AA|A|1318
8FIZ|1|AA|A|1319
8FIZ|1|AA|C|1320
8FIZ|1|AA|U|1321
8FIZ|1|AA|C|1322
8FIZ|1|AA|G|1323
8FIZ|1|AA|A|1324
8FIZ|1|AA|C|1325
8FIZ|1|AA|U|1326
8FIZ|1|AA|C|1327

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AD

30S ribosomal protein S19

Chain AE

30S ribosomal protein S13

Chain AF

30S ribosomal protein S14

Chain AV

50S ribosomal protein L31