HL_8FIZ_056

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUCAC

Length

5 nucleotides

Bulged bases

8FIZ|1|BA|C|885

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FIZ_056 not in the Motif Atlas

Geometric match to HL_4V9F_003

Geometric discrepancy: 0.3909

The information below is about HL_4V9F_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

8FIZ|1|BA|G|883
8FIZ|1|BA|U|884
8FIZ|1|BA|C|885
8FIZ|1|BA|A|892
8FIZ|1|BA|C|893

Current chains

Chain BA

23S rRNA

Nearby chains

Chain AE

30S ribosomal protein S13