HL_8FIZ_093

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FIZ_093 not in the Motif Atlas

Homologous match to HL_7RQB_063

Geometric discrepancy: 0.119

The information below is about HL_7RQB_063

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

8FIZ|1|BA|C|2594
8FIZ|1|BA|G|2595
8FIZ|1|BA|U|2596
8FIZ|1|BA|G|2597
8FIZ|1|BA|A|2598
8FIZ|1|BA|G|2599

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BB

Transfer RNA; tRNA

Chain BD

50S ribosomal protein L2