HL_8FKP_024

3D structure

PDB id

8FKP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State A1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

GGAUGAAC

Length

8 nucleotides

Bulged bases

8FKP|1|L3|A|1891

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKP|1|L3|G|1886
8FKP|1|L3|G|1887
8FKP|1|L3|A|1888
8FKP|1|L3|U|1889
8FKP|1|L3|G|1890
8FKP|1|L3|A|1891
8FKP|1|L3|A|1892
8FKP|1|L3|C|1893

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LQ

60S ribosomal protein L32

Chain LT

60S ribosomal protein L35a

Chain SN

Probable rRNA-processing protein EBP2