HL_8FKP_025

3D structure

PDB id

8FKP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State A1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

CUCGGCGCUGGAG

Length

13 nucleotides

Bulged bases

8FKP|1|L3|G|2055

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKP|1|L3|C|1926
8FKP|1|L3|U|1927
8FKP|1|L3|C|1928
8FKP|1|L3|G|2049
8FKP|1|L3|G|2050
8FKP|1|L3|C|2051
8FKP|1|L3|G|2052
8FKP|1|L3|C|2053
8FKP|1|L3|U|2054
8FKP|1|L3|G|2055
8FKP|1|L3|G|2056
8FKP|1|L3|A|2057
8FKP|1|L3|G|2058

Current chains

Chain L3

28S rRNA

Nearby chains

Chain L7

60S ribosomal protein L13a

Chain L8

60S ribosomal protein L14

Chain LC

60S ribosomal protein L18a

Chain LT

60S ribosomal protein L35a

Chain SN

Probable rRNA-processing protein EBP2