HL_8FKS_006
3D structure
- PDB id
- 8FKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nucleolar pre-60S ribosomal subunit (State B2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.88 Å
Loop
- Sequence
- CUGAAAGCAUAUUAGUCAG
- Length
- 19 nucleotides
- Bulged bases
- 8FKS|1|L3|G|40
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8FKS|1|L3|C|30
8FKS|1|L3|U|31
8FKS|1|L3|G|32
8FKS|1|L3|A|33
8FKS|1|L3|A|34
8FKS|1|L3|A|39
8FKS|1|L3|G|40
8FKS|1|L3|C|41
8FKS|1|L3|A|42
8FKS|1|L3|U|43
8FKS|1|L3|A|44
8FKS|1|L3|U|45
8FKS|1|L3|U|46
8FKS|1|L3|A|47
8FKS|1|L3|G|48
8FKS|1|L3|U|49
8FKS|1|L3|C|50
8FKS|1|L3|A|51
8FKS|1|L3|G|52
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain L6
- 60S ribosomal protein L13
- Chain L9
- 60S ribosomal protein L15
- Chain LW
- 60S ribosomal protein L37
- Chain SN
- Probable rRNA-processing protein EBP2
- Chain SO
- Ribosome biogenesis protein BRX1 homolog
- Chain ST
- Ribosome biogenesis regulatory protein homolog
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