HL_8FKS_038
3D structure
- PDB id
- 8FKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nucleolar pre-60S ribosomal subunit (State B2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.88 Å
Loop
- Sequence
- UCGCACGAAA
- Length
- 10 nucleotides
- Bulged bases
- 8FKS|1|L3|C|1365, 8FKS|1|L3|A|1371
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8FKS|1|L3|U|1364
8FKS|1|L3|C|1365
8FKS|1|L3|G|1366
8FKS|1|L3|C|1367
8FKS|1|L3|A|1368
8FKS|1|L3|C|1369
8FKS|1|L3|G|1370
8FKS|1|L3|A|1371
8FKS|1|L3|A|1372
8FKS|1|L3|A|1373
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain L1
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain L6
- 60S ribosomal protein L13
- Chain L9
- 60S ribosomal protein L15
- Chain LI
- 60S ribosomal protein L26
- Chain SA
- 60S ribosomal protein L4
- Chain SZ
- Nucleolar protein 16
Coloring options: