HL_8FKV_020

3D structure

PDB id

8FKV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State D1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

CCCAGUCCG

Length

9 nucleotides

Bulged bases

8FKV|1|L3|U|1445, 8FKV|1|L3|C|1447

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKV|1|L3|C|1436
8FKV|1|L3|C|1441
8FKV|1|L3|C|1442
8FKV|1|L3|A|1443
8FKV|1|L3|G|1444
8FKV|1|L3|U|1445
8FKV|1|L3|C|1446
8FKV|1|L3|C|1447
8FKV|1|L3|G|1448

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L18

Chain NO

Ribosomal RNA processing protein 1 homolog A

Chain SA

60S ribosomal protein L4

Chain SC

60S ribosomal protein L6

Chain SD

60S ribosomal protein L7