HL_8FKV_038

3D structure

PDB id

8FKV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State D1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

UUUGGGUUUUA

Length

11 nucleotides

Bulged bases

8FKV|1|L3|G|4357

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKV|1|L3|U|4352
8FKV|1|L3|U|4353
8FKV|1|L3|U|4354
8FKV|1|L3|G|4355
8FKV|1|L3|G|4356
8FKV|1|L3|G|4357
8FKV|1|L3|U|4358
8FKV|1|L3|U|4359
8FKV|1|L3|U|4360
8FKV|1|L3|U|4361
8FKV|1|L3|A|4362

Current chains

Chain L3

28S rRNA

Nearby chains

Chain BB

60S ribosomal protein L10a

Chain SY

Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase