HL_8FKW_038

3D structure

PDB id

8FKW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State D2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UUUGGGUUUUA

Length

11 nucleotides

Bulged bases

8FKW|1|L3|G|4357

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKW|1|L3|U|4352
8FKW|1|L3|U|4353
8FKW|1|L3|U|4354
8FKW|1|L3|G|4355
8FKW|1|L3|G|4356
8FKW|1|L3|G|4357
8FKW|1|L3|U|4358
8FKW|1|L3|U|4359
8FKW|1|L3|U|4360
8FKW|1|L3|U|4361
8FKW|1|L3|A|4362

Current chains

Chain L3

28S rRNA

Nearby chains

Chain BB

60S ribosomal protein L10a

Chain SY

Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase