HL_8FKX_032

3D structure

PDB id

8FKX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State E)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

AGAGUGAAU

Length

9 nucleotides

Bulged bases

8FKX|1|L3|G|2574, 8FKX|1|L3|G|2576

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKX|1|L3|A|2551
8FKX|1|L3|G|2552
8FKX|1|L3|A|2553
8FKX|1|L3|G|2574
8FKX|1|L3|U|2575
8FKX|1|L3|G|2576
8FKX|1|L3|A|2765
8FKX|1|L3|A|2766
8FKX|1|L3|U|2767

Current chains

Chain L3

28S rRNA

Nearby chains

Chain SI

60S ribosomal protein L7-like 1

Chain SM

Pescadillo homolog

Chain SS

Ribosome biogenesis protein BOP1