HL_8FKZ_019

3D structure

PDB id

8FKZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State G)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

UCAAACA

Length

7 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FKZ_019 not in the Motif Atlas

Geometric match to HL_361D_002

Geometric discrepancy: 0.3137

The information below is about HL_361D_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

8FKZ|1|L3|U|1317
8FKZ|1|L3|C|1318
8FKZ|1|L3|A|1322
8FKZ|1|L3|A|1323
8FKZ|1|L3|A|1324
8FKZ|1|L3|C|1325
8FKZ|1|L3|A|1326

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LK

60S ribosomal protein L27a

Chain LQ

60S ribosomal protein L32