HL_8FKZ_042
3D structure
- PDB id
- 8FKZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nucleolar pre-60S ribosomal subunit (State G)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- GUUCUCUUU
- Length
- 9 nucleotides
- Bulged bases
- 8FKZ|1|L3|U|2631
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FKZ_042 not in the Motif Atlas
- Homologous match to HL_8C3A_037
- Geometric discrepancy: 0.1733
- The information below is about HL_8C3A_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01927.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8FKZ|1|L3|G|2624
8FKZ|1|L3|U|2625
8FKZ|1|L3|U|2626
8FKZ|1|L3|C|2627
8FKZ|1|L3|U|2628
8FKZ|1|L3|C|2629
8FKZ|1|L3|U|2630
8FKZ|1|L3|U|2631
8FKZ|1|L3|U|2632
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain LD
- 60S ribosomal protein L19
- Chain LF
- 60S ribosomal protein L22
- Chain SR
- GTP-binding protein 4
- Chain SV
- Probable ribosome biogenesis protein RLP24
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