HL_8FKZ_051
3D structure
- PDB id
- 8FKZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nucleolar pre-60S ribosomal subunit (State G)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- UUUGGGUUUUA
- Length
- 11 nucleotides
- Bulged bases
- 8FKZ|1|L3|U|4354
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FKZ_051 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.1886
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
8FKZ|1|L3|U|4352
8FKZ|1|L3|U|4353
8FKZ|1|L3|U|4354
8FKZ|1|L3|G|4355
8FKZ|1|L3|G|4356
8FKZ|1|L3|G|4357
8FKZ|1|L3|U|4358
8FKZ|1|L3|U|4359
8FKZ|1|L3|U|4360
8FKZ|1|L3|U|4361
8FKZ|1|L3|A|4362
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain L6
- 60S ribosomal protein L13
- Chain LK
- 60S ribosomal protein L27a
- Chain LU
- 60S ribosomal protein L36
Coloring options: