HL_8FL2_019

3D structure

PDB id

8FL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State I1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.67 Å

Loop

Sequence

C(OMG)UCUUG(1MA)AAC(A2M)CG

Length

14 nucleotides

Bulged bases

8FL2|1|L3|U|1320

QA status

Modified nucleotides: OMG, 1MA, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FL2|1|L3|C|1315
8FL2|1|L3|OMG|1316
8FL2|1|L3|U|1317
8FL2|1|L3|C|1318
8FL2|1|L3|U|1319
8FL2|1|L3|U|1320
8FL2|1|L3|G|1321
8FL2|1|L3|1MA|1322
8FL2|1|L3|A|1323
8FL2|1|L3|A|1324
8FL2|1|L3|C|1325
8FL2|1|L3|A2M|1326
8FL2|1|L3|C|1327
8FL2|1|L3|G|1328

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LK

60S ribosomal protein L27a

Chain LQ

60S ribosomal protein L32

Chain NC

Nucleolar GTP-binding protein 2

Chain SA

60S ribosomal protein L4