3D structure

PDB id
8FL2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human nuclear pre-60S ribosomal subunit (State I1)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.67 Å

Loop

Sequence
GGC
Length
3 nucleotides
Bulged bases
None detected
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_8FL2_076 not in the Motif Atlas
Geometric match to HL_2Y9H_003
Geometric discrepancy: 0.1351
The information below is about HL_2Y9H_003
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75660.7
Basepair signature
cWW-F
Number of instances in this motif group
22

Unit IDs

8FL2|1|L4|G|86
8FL2|1|L4|G|87
8FL2|1|L4|C|91

Current chains

Chain L4
5S rRNA

Nearby chains

Chain L3
Large subunit ribosomal RNA; LSU rRNA
Chain LC
60S ribosomal protein L18a
Chain NB
Guanine nucleotide-binding protein-like 3
Chain SD
60S ribosomal protein L7

Coloring options:


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