HL_8FL7_032

3D structure

PDB id

8FL7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State J2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

CAGUCGAGAGUGGACGGGAGCGGCGCGCGGACGCUACG

Length

38 nucleotides

Bulged bases

8FL7|1|L3|U|2097, 8FL7|1|L3|U|2267, 8FL7|1|L3|C|2269

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FL7|1|L3|C|2087
8FL7|1|L3|A|2088
8FL7|1|L3|G|2089
8FL7|1|L3|U|2090
8FL7|1|L3|C|2091
8FL7|1|L3|G|2092
8FL7|1|L3|A|2093
8FL7|1|L3|G|2094
8FL7|1|L3|A|2095
8FL7|1|L3|G|2096
8FL7|1|L3|U|2097
8FL7|1|L3|G|2098
8FL7|1|L3|G|2099
8FL7|1|L3|A|2100
8FL7|1|L3|C|2101
8FL7|1|L3|G|2102
8FL7|1|L3|G|2103
8FL7|1|L3|G|2104
8FL7|1|L3|A|2105
8FL7|1|L3|G|2106
8FL7|1|L3|C|2107
8FL7|1|L3|G|2108
8FL7|1|L3|G|2109
8FL7|1|L3|C|2110
8FL7|1|L3|G|2111
8FL7|1|L3|C|2258
8FL7|1|L3|G|2259
8FL7|1|L3|C|2260
8FL7|1|L3|G|2261
8FL7|1|L3|G|2262
8FL7|1|L3|A|2263
8FL7|1|L3|C|2264
8FL7|1|L3|G|2265
8FL7|1|L3|C|2266
8FL7|1|L3|U|2267
8FL7|1|L3|A|2268
8FL7|1|L3|C|2269
8FL7|1|L3|G|2270

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L18

Chain LL

60S ribosomal protein L28

Chain LM

60S ribosomal protein L29

Chain SA

60S ribosomal protein L4

Chain SC

60S ribosomal protein L6

Chain SD

60S ribosomal protein L7