HL_8FL7_080
3D structure
- PDB id
- 8FL7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State J2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.55 Å
Loop
- Sequence
- AAGCAGAAUU
- Length
- 10 nucleotides
- Bulged bases
- 8FL7|1|L3|G|4475
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FL7_080 not in the Motif Atlas
- Geometric match to HL_3W3S_002
- Geometric discrepancy: 0.3934
- The information below is about HL_3W3S_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.2
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 42
Unit IDs
8FL7|1|L3|A|4473
8FL7|1|L3|A|4474
8FL7|1|L3|G|4475
8FL7|1|L3|C|4476
8FL7|1|L3|A|4477
8FL7|1|L3|G|4478
8FL7|1|L3|A|4479
8FL7|1|L3|A|4480
8FL7|1|L3|U|4481
8FL7|1|L3|U|4482
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain LG
- 60S ribosomal protein L23
- Chain NF
- Ribosome biogenesis protein NSA2 homolog
- Chain SG
- 60S ribosomal protein L9
- Chain SR
- GTP-binding protein 4
Coloring options: