HL_8FLA_029

3D structure

PDB id

8FLA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State K1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

AGUU

Length

4 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FLA_029 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.2072

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

8FLA|1|L3|A|1738
8FLA|1|L3|G|1739
8FLA|1|L3|U|1790
8FLA|1|L3|U|1791

Current chains

Chain L3

28S rRNA

Nearby chains

Chain L4

5S ribosomal RNA; 5S rRNA

Chain LE

60S ribosomal protein L21

Chain NR

Translation machinery-associated protein 16

Chain SB

60S ribosomal protein L5