HL_8FLA_035

3D structure

PDB id

8FLA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State K1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

CAGUCGAGAGUGGACGGGAGCGGCGCGCGGACGCUACG

Length

38 nucleotides

Bulged bases

8FLA|1|L3|U|2097, 8FLA|1|L3|U|2267, 8FLA|1|L3|C|2269

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FLA|1|L3|C|2087
8FLA|1|L3|A|2088
8FLA|1|L3|G|2089
8FLA|1|L3|U|2090
8FLA|1|L3|C|2091
8FLA|1|L3|G|2092
8FLA|1|L3|A|2093
8FLA|1|L3|G|2094
8FLA|1|L3|A|2095
8FLA|1|L3|G|2096
8FLA|1|L3|U|2097
8FLA|1|L3|G|2098
8FLA|1|L3|G|2099
8FLA|1|L3|A|2100
8FLA|1|L3|C|2101
8FLA|1|L3|G|2102
8FLA|1|L3|G|2103
8FLA|1|L3|G|2104
8FLA|1|L3|A|2105
8FLA|1|L3|G|2106
8FLA|1|L3|C|2107
8FLA|1|L3|G|2108
8FLA|1|L3|G|2109
8FLA|1|L3|C|2110
8FLA|1|L3|G|2111
8FLA|1|L3|C|2258
8FLA|1|L3|G|2259
8FLA|1|L3|C|2260
8FLA|1|L3|G|2261
8FLA|1|L3|G|2262
8FLA|1|L3|A|2263
8FLA|1|L3|C|2264
8FLA|1|L3|G|2265
8FLA|1|L3|C|2266
8FLA|1|L3|U|2267
8FLA|1|L3|A|2268
8FLA|1|L3|C|2269
8FLA|1|L3|G|2270

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L18

Chain LL

60S ribosomal protein L28

Chain LM

60S ribosomal protein L29

Chain SA

60S ribosomal protein L4

Chain SC

60S ribosomal protein L6

Chain SD

60S ribosomal protein L7