HL_8FLA_061

3D structure

PDB id

8FLA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State K1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

GACAGAAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FLA_061 not in the Motif Atlas

Homologous match to HL_8C3A_057

Geometric discrepancy: 0.1736

The information below is about HL_8C3A_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_72777.1

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

8FLA|1|L3|G|4250
8FLA|1|L3|A|4251
8FLA|1|L3|C|4252
8FLA|1|L3|A|4253
8FLA|1|L3|G|4254
8FLA|1|L3|A|4255
8FLA|1|L3|A|4256
8FLA|1|L3|A|4257
8FLA|1|L3|C|4258

Current chains

Chain L3

28S rRNA

Nearby chains

Chain L5

60S ribosomal protein L11