HL_8FLA_083

3D structure

PDB id

8FLA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State K1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

(A2M)GAAAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FLA_083 not in the Motif Atlas

Homologous match to HL_8C3A_048

Geometric discrepancy: 0.1318

The information below is about HL_8C3A_048

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

8FLA|1|L3|A2M|3724
8FLA|1|L3|G|3725
8FLA|1|L3|A|3726
8FLA|1|L3|A|3727
8FLA|1|L3|A|3728
8FLA|1|L3|U|3729

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LU

60S ribosomal protein L36

Chain LV

60S ribosomal protein L36a